Xenopus tropicalis 9.0: 8.761 kbp from scaffold

DNA

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GC Content

GSE37452_Transcriptome_Development

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embryo_stage_13_14_2_SRR489465	embryo_stage_9_2_SRR489461	embryo_stage_19_2_SRR489467
embryo_stage_31_32_1_SRR489451	embryo_stage_24_26_1_SRR489449	embryo_stage_22_23_1_SRR489448
embryo_stage_20_21_1_SRR489447	embryo_8_cell_2_SRR489457	embryo_stage_15_1_SRR489443
embryo_stage_44_45_2_SRR489478	embryo_stage_11_12_1_SRR489441	embryo_stage_22_23_2_SRR489469
embryo_stage_6_2_SRR489459	embryo_stage_19_1_SRR489445	embryo_stage_24_26_2_SRR489470
embryo_stage_31_32_2_SRR489473	embryo_stage_8_2_SRR489460	embryo_2_cell_2_SRR489455
embryo_stage_10_2_SRR489462	embryo_stage_24_26_2_SRR489471	embryo_stage_13_14_2_SRR489464
embryo_stage_10_1_SRR489440	embryo_16_cell_2_SRR489458	embryo_4_cell_2_SRR489456
embryo_stage_19_1_SRR489446	embryo_stage_16_18_2_SRR489466	embryo_stage_40_1_SRR489453
embryo_stage_11_12_1_SRR489442	embryo_stage_33_34_2_SRR489474	embryo_stage_28_2_SRR489472
embryo_stage_41_42_1_SRR489454	embryo_stage_40_2_SRR489476	embryo_stage_38_39_2_SRR489475
embryo_stage_28_1_SRR489450	embryo_stage_41_42_2_SRR489477	embryo_stage_9_1_SRR489439
embryo_stage_33_34_1_SRR489452	embryo_stage_11_12_2_SRR489463	embryo_stage_16_18_1_SRR489444

H3K27me3 methylation ChIP-seq

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H3K27me3_stage105.xt9_0	H3K27me3_stage105.Rep.xt9_0	H3K27me3_stage12_5.Rep.xt9_0
H3K27me3_stage09.xt9_0	H3K27me3_stage09.Rep.xt9_0	H3K27me3_stage16.Rep.xt9_0
H3K27me3_stage12_5.xt9_0	H3K27me3_stage16.xt9_0
H3K27me3_stage30.Rep.xt9_0	H3K27me3_stage30.xt9_0

H3K36me3 methylation ChIP-seq

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H3K36me3_stage09.xt9_0	H3K36me3_stage12_5.Rep.xt9_0	H3K36me3_stage16.xt9_0
H3K36me3_stage30.Rep.xt9_0	H3K36me3_stage16.Rep.xt9_0	H3K36me3_stage09.Rep.xt9_0
H3K36me3_stage12_5.xt9_0	H3K36me3_stage105.Rep.xt9_0
H3K36me3_stage30.xt9_0	H3K36me3_stage105.xt9_0

H3K4me1 methylation ChIP-seq

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H3K4me1_stage105.Rep.xt9_0	H3K4me1_stage16.xt9_0	H3K4me1_stage105.xt9_0
H3K4me1_stage09.Rep.xt9_0	H3K4me1_stage12_5.Rep.xt9_0	H3K4me1_stage16.Rep.xt9_0
H3K4me1_stage30.xt9_0	H3K4me1_stage09.xt9_0
H3K4me1_stage12_5.xt9_0	H3K4me1_stage30.Rep.xt9_0

H3K4me3 methylation ChIP-seq

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H3K4me3_stage16.xt9_0	H3K4me3_stage12_5.Rep.xt9_0	H3K4me3_stage12_5.xt9_0
H3K4me3_stage30.Rep.xt9_0	H3K4me3_stage105.Rep.xt9_0	H3K4me3_stage105.xt9_0
H3K4me3_stage30.xt9_0	H3K4me3_stage16.Rep.xt9_0
H3K4me3_stage09.Rep.xt9_0	H3K4me3_stage09.xt9_0

H3K9ac methylation ChIP-seq

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H3K9ac_stage105.xt9_0	H3K9ac_stage09.xt9_0	H3K9ac_stage30.xt9_0
H3K9ac_stage30.Rep.xt9_0	H3K9ac_stage12_5.Rep.xt9_0	H3K9ac_stage105.Rep.xt9_0
H3K9ac_stage12_5.xt9_0	H3K9ac_stage16.Rep.xt9_0
H3K9ac_stage09.Rep.xt9_0	H3K9ac_stage16.xt9_0

H3K9me2 methylation ChIP-seq

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H3K9me2_stage16.Rep.xt9_0	H3K9me2_stage12_5.Rep.xt9_0	H3K9me2_stage12_5.xt9_0
H3K9me2_stage30.xt9_0	H3K9me2_stage09.xt9_0	H3K9me2_stage09.Rep.xt9_0
H3K9me2_stage16.xt9_0	H3K9me2_stage30.Rep.xt9_0
H3K9me2_stage105.Rep.xt9_0	H3K9me2_stage105.xt9_0

H3K9me3 methylation ChIP-seq

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H3K9me3_stage09.Rep.xt9_0	H3K9me3_stage30.xt9_0	H3K9me3_stage12_5.xt9_0
H3K9me3_stage30.Rep.xt9_0	H3K9me3_stage16.xt9_0	H3K9me3_stage09.xt9_0
H3K9me3_stage105.xt9_0	H3K9me3_stage12_5.Rep.xt9_0
H3K9me3_stage105.Rep.xt9_0	H3K9me3_stage16.Rep.xt9_0

H4K20me3 methylation ChIP-seq

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H4K20me3_stage09.xt9_0	H4K20me3_stage12_5.xt9_0	H4K20me3_stage16.Rep.xt9_0
H4K20me3_stage30.Rep.xt9_0	H4K20me3_stage30.xt9_0	H4K20me3_stage09.Rep.xt9_0
H4K20me3_stage12_5.Rep.xt9_0	H4K20me3_stage105.xt9_0
H4K20me3_stage105.Rep.xt9_0	H4K20me3_stage16.xt9_0

JGI

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JGI 9.0 Primary Transcripts

JGI 9.0 Alternate Transcripts

RNAPII ChIP-seq

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RNAPII_stage30.xt9_0	RNAPII_stage16.xt9_0	RNAPII_stage105.xt9_0
RNAPII_stage30.Rep.xt9_0	RNAPII_stage12_5.xt9_0	RNAPII_stage09.Rep.xt9_0
RNAPII_stage12_5.Rep.xt9_0	RNAPII_stage09.xt9_0
RNAPII_stage16.Rep.xt9_0	RNAPII_stage105.Rep.xt9_0

P300 methylation ChIP-seq

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p300_stage105.xt9_0	p300_stage16.Rep.xt9_0	p300_stage12_5.Rep.xt9_0
p300_stage09.xt9_0	p300_stage30.Rep.xt9_0	p300_stage09.Rep.xt9_0
p300_stage16.xt9_0	p300_stage12_5.xt9_0
p300_stage30.xt9_0	p300_stage105.Rep.xt9_0

Analysis

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Blast Against Displayed Sequence

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Show tooltips		Region Size (bp)

Xenopus tropicalis 9.0: 8.761 kbp from scaffold_51:583,990..592,750

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Community Tracks

Custom Tracks

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Data Source	Scroll/Zoom: Flip